MCP serverCommunity

phylokit-mcp

Phylogenetic inference via IQ-TREE 3 — never returns a topology without its support

musharna · ↓ 0 installs

Install

Add the config to your client settings. Replace values in <angle brackets> with your own.

claude_desktop_config.json

{
  "mcpServers": {
    "phylokit-mcp": {
      "command": "uvx",
      "args": [
        "phylokit-mcp==0.8.0"
      ],
      "env": {
        "OMP_NUM_THREADS": "<OMP_NUM_THREADS>",
        "MKL_NUM_THREADS": "<MKL_NUM_THREADS>"
      }
    }
  }
}

Or in one command — the CLI adds the server to your client config:

CLI

npx ai-point add io.github.musharna/phylokit-mcp

Tools

The tool list will appear once the server has a sandbox or the editors fill it in.

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